Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
PSMC3P17980 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PSMC3P17980 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PSMC3P17980 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PSMC3P17980 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PSMC3P17980 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
PSMC3P17980 AC016769.1-201ENST00000409132 1010 ntBASIC22.77■■□□□ 1.24
PSMC3P17980 AC137761.2-201ENST00000561729 223 ntBASIC22.77■■□□□ 1.24
PSMC3P17980 AC145350.3-201ENST00000569033 163 ntBASIC22.77■■□□□ 1.24
PSMC3P17980 AC068587.7-201ENST00000641602 218 ntBASIC22.77■■□□□ 1.24
PSMC3P17980 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PSMC3P17980 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PSMC3P17980 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.77■■□□□ 1.23
PSMC3P17980 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
PSMC3P17980 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PSMC3P17980 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PSMC3P17980 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PSMC3P17980 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PSMC3P17980 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PSMC3P17980 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.76■■□□□ 1.23
PSMC3P17980 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PSMC3P17980 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.76■■□□□ 1.23
PSMC3P17980 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.76■■□□□ 1.23
PSMC3P17980 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.75■■□□□ 1.23
PSMC3P17980 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.75■■□□□ 1.23
PSMC3P17980 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 HLA-L-209ENST00000420110 1011 ntBASIC22.75■■□□□ 1.23
PSMC3P17980 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PSMC3P17980 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.75■■□□□ 1.23
PSMC3P17980 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PSMC3P17980 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.75■■□□□ 1.23
PSMC3P17980 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.75■■□□□ 1.23
PSMC3P17980 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.75■■□□□ 1.23
PSMC3P17980 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PSMC3P17980 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PSMC3P17980 BX005040.4-201ENST00000637145 1518 ntBASIC22.75■■□□□ 1.23
PSMC3P17980 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
PSMC3P17980 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PSMC3P17980 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
PSMC3P17980 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PSMC3P17980 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.74■■□□□ 1.23
PSMC3P17980 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.74■■□□□ 1.23
PSMC3P17980 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PSMC3P17980 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.74■■□□□ 1.23
PSMC3P17980 AC004687.1-201ENST00000579003 1625 ntBASIC22.74■■□□□ 1.23
PSMC3P17980 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.74■■□□□ 1.23
PSMC3P17980 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.73■■□□□ 1.23
PSMC3P17980 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.73■■□□□ 1.23
PSMC3P17980 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.73■■□□□ 1.23
PSMC3P17980 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.73■■□□□ 1.23
PSMC3P17980 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.73■■□□□ 1.23
PSMC3P17980 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.73■■□□□ 1.23
PSMC3P17980 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PSMC3P17980 AP004607.4-201ENST00000530158 1459 ntBASIC22.73■■□□□ 1.23
PSMC3P17980 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PSMC3P17980 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PSMC3P17980 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.72■■□□□ 1.23
PSMC3P17980 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.72■■□□□ 1.23
PSMC3P17980 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.72■■□□□ 1.23
PSMC3P17980 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.72■■□□□ 1.23
PSMC3P17980 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PSMC3P17980 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
PSMC3P17980 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.71■■□□□ 1.23
PSMC3P17980 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.71■■□□□ 1.23
PSMC3P17980 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.71■■□□□ 1.23
PSMC3P17980 AC087239.1-201ENST00000622671 572 ntBASIC22.71■■□□□ 1.23
PSMC3P17980 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.71■■□□□ 1.23
PSMC3P17980 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.71■■□□□ 1.23
PSMC3P17980 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.71■■□□□ 1.23
PSMC3P17980 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
PSMC3P17980 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PSMC3P17980 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PSMC3P17980 AC079630.1-202ENST00000618127 1840 ntBASIC22.71■■□□□ 1.23
PSMC3P17980 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.7■■□□□ 1.23
PSMC3P17980 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PSMC3P17980 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PSMC3P17980 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PSMC3P17980 AC068473.5-201ENST00000616428 2072 ntBASIC22.7■■□□□ 1.23
PSMC3P17980 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PSMC3P17980 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PSMC3P17980 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms