Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSSCA1O60232 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.76■□□□□ 0.43
SSSCA1O60232 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSSCA1O60232 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSSCA1O60232 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
SSSCA1O60232 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.75■□□□□ 0.43
SSSCA1O60232 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.75■□□□□ 0.43
SSSCA1O60232 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 AC004448.1-201ENST00000458332 883 ntBASIC17.75■□□□□ 0.43
SSSCA1O60232 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SSSCA1O60232 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSSCA1O60232 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.75■□□□□ 0.43
SSSCA1O60232 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSSCA1O60232 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSSCA1O60232 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSSCA1O60232 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSSCA1O60232 AC022616.5-201ENST00000518796 181 ntBASIC17.74■□□□□ 0.43
SSSCA1O60232 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSSCA1O60232 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.74■□□□□ 0.43
SSSCA1O60232 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.74■□□□□ 0.43
SSSCA1O60232 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSSCA1O60232 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSSCA1O60232 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SSSCA1O60232 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSSCA1O60232 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.74■□□□□ 0.43
SSSCA1O60232 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSSCA1O60232 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSSCA1O60232 RNF126P1-201ENST00000567452 1320 ntBASIC17.73■□□□□ 0.43
SSSCA1O60232 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSSCA1O60232 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.73■□□□□ 0.43
SSSCA1O60232 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.73■□□□□ 0.43
SSSCA1O60232 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 LINC01960-201ENST00000563759 1884 ntBASIC17.73■□□□□ 0.43
SSSCA1O60232 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.73■□□□□ 0.43
SSSCA1O60232 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SSSCA1O60232 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSSCA1O60232 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
SSSCA1O60232 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.72■□□□□ 0.43
SSSCA1O60232 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 AF131216.4-201ENST00000638924 1588 ntBASIC17.72■□□□□ 0.43
SSSCA1O60232 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSSCA1O60232 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSSCA1O60232 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 AC244015.2-201ENST00000616358 1861 ntBASIC17.71■□□□□ 0.43
SSSCA1O60232 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.71■□□□□ 0.43
SSSCA1O60232 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SSSCA1O60232 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSSCA1O60232 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSSCA1O60232 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.7■□□□□ 0.42
SSSCA1O60232 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.7■□□□□ 0.42
SSSCA1O60232 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.7■□□□□ 0.42
SSSCA1O60232 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.7■□□□□ 0.42
SSSCA1O60232 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.7■□□□□ 0.42
SSSCA1O60232 AC120024.1-201ENST00000562672 995 ntBASIC17.7■□□□□ 0.42
SSSCA1O60232 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.7■□□□□ 0.42
SSSCA1O60232 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SSSCA1O60232 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms