Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NDUFA4O00483 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDUFA4O00483 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDUFA4O00483 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDUFA4O00483 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NDUFA4O00483 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDUFA4O00483 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDUFA4O00483 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.75■□□□□ 0.27
NDUFA4O00483 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NDUFA4O00483 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NDUFA4O00483 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 AC137767.1-201ENST00000602918 1920 ntBASIC16.74■□□□□ 0.27
NDUFA4O00483 AC079834.2-201ENST00000609776 1949 ntBASIC16.74■□□□□ 0.27
NDUFA4O00483 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.74■□□□□ 0.27
NDUFA4O00483 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.74■□□□□ 0.27
NDUFA4O00483 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.74■□□□□ 0.27
NDUFA4O00483 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NDUFA4O00483 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.74■□□□□ 0.27
NDUFA4O00483 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 AL136162.1-201ENST00000607711 1078 ntBASIC16.74■□□□□ 0.27
NDUFA4O00483 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
NDUFA4O00483 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NDUFA4O00483 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA4O00483 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NDUFA4O00483 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NDUFA4O00483 AC135279.3-201ENST00000610945 1311 ntBASIC16.73■□□□□ 0.27
NDUFA4O00483 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.73■□□□□ 0.27
NDUFA4O00483 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.73■□□□□ 0.27
NDUFA4O00483 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.73■□□□□ 0.27
NDUFA4O00483 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.73■□□□□ 0.27
NDUFA4O00483 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA4O00483 LINC00526-201ENST00000581067 1875 ntBASIC16.73■□□□□ 0.27
NDUFA4O00483 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NDUFA4O00483 AC080038.3-201ENST00000623346 1952 ntBASIC16.73■□□□□ 0.27
NDUFA4O00483 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
NDUFA4O00483 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA4O00483 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA4O00483 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA4O00483 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA4O00483 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA4O00483 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA4O00483 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFA4O00483 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFA4O00483 AC024257.2-201ENST00000549699 147 ntBASIC16.72■□□□□ 0.27
NDUFA4O00483 MIR4767-201ENST00000582827 78 ntBASIC16.72■□□□□ 0.27
NDUFA4O00483 AC010525.1-201ENST00000585559 441 ntBASIC16.72■□□□□ 0.27
NDUFA4O00483 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFA4O00483 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFA4O00483 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFA4O00483 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NDUFA4O00483 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFA4O00483 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA4O00483 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA4O00483 AC092053.2-201ENST00000640557 1818 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFA4O00483 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NDUFA4O00483 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFA4O00483 BX842568.3-201ENST00000418104 571 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 AC096631.2-201ENST00000436136 790 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.71■□□□□ 0.27
NDUFA4O00483 SLC47A1P1-202ENST00000449666 945 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 AC010141.3-201ENST00000456659 717 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 AP005435.1-201ENST00000529293 1178 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA4O00483 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA4O00483 AC139530.1-201ENST00000575312 1977 ntBASIC16.71■□□□□ 0.27
NDUFA4O00483 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA4O00483 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
NDUFA4O00483 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFA4O00483 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFA4O00483 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFA4O00483 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA4O00483 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NDUFA4O00483 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms