Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LST1O00453 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 FEM1AP4-201ENST00000443167 1987 ntBASIC14.2□□□□□ -0.14
LST1O00453 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LST1O00453 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.2□□□□□ -0.14
LST1O00453 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.2□□□□□ -0.14
LST1O00453 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LST1O00453 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LST1O00453 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.2□□□□□ -0.14
LST1O00453 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.2□□□□□ -0.14
LST1O00453 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.19□□□□□ -0.14
LST1O00453 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LST1O00453 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.19□□□□□ -0.14
LST1O00453 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
LST1O00453 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.19□□□□□ -0.14
LST1O00453 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LST1O00453 Z98882.1-201ENST00000622160 2253 ntBASIC14.18□□□□□ -0.14
LST1O00453 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.18□□□□□ -0.14
LST1O00453 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LST1O00453 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LST1O00453 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 AP006261.1-201ENST00000584783 668 ntBASIC14.18□□□□□ -0.14
LST1O00453 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LST1O00453 AC087289.5-201ENST00000586076 3175 ntBASIC14.18□□□□□ -0.14
LST1O00453 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.18□□□□□ -0.14
LST1O00453 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LST1O00453 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.18□□□□□ -0.14
LST1O00453 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LST1O00453 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LST1O00453 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
LST1O00453 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.17□□□□□ -0.14
LST1O00453 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LST1O00453 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 FEM1AP1-201ENST00000431297 1995 ntBASIC14.17□□□□□ -0.14
LST1O00453 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.17□□□□□ -0.14
LST1O00453 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.17□□□□□ -0.14
LST1O00453 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.17□□□□□ -0.14
LST1O00453 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.17□□□□□ -0.14
LST1O00453 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LST1O00453 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.17□□□□□ -0.14
LST1O00453 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.17□□□□□ -0.14
LST1O00453 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LST1O00453 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LST1O00453 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.16□□□□□ -0.14
LST1O00453 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LST1O00453 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.16□□□□□ -0.14
LST1O00453 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LST1O00453 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LST1O00453 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LST1O00453 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LST1O00453 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LST1O00453 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LST1O00453 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms