Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 AC120024.1-201ENST00000562672 995 ntBASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MEIS3P1A6NDR6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
MEIS3P1A6NDR6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MEIS3P1A6NDR6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MEIS3P1A6NDR6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MEIS3P1A6NDR6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 AC022616.5-201ENST00000518796 181 ntBASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 U85056.1-201ENST00000616429 682 ntBASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MEIS3P1A6NDR6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 LINC01960-201ENST00000563759 1884 ntBASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 AC139795.1-202ENST00000500444 432 ntBASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.61■□□□□ 0.57
MEIS3P1A6NDR6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms