Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM238LA0A1B0GVL6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 NOC2LP1-202ENST00000452600 2235 ntBASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 ZNRF2P1-201ENST00000441407 443 ntBASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 AC112907.3-201ENST00000577781 2400 ntBASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM238LA0A1B0GVL6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM238LA0A1B0GVL6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 AL139384.1-201ENST00000612143 3047 ntBASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM238LA0A1B0GVL6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM238LA0A1B0GVL6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM238LA0A1B0GVL6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TMEM238LA0A1B0GVL6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM238LA0A1B0GVL6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM238LA0A1B0GVL6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM238LA0A1B0GVL6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM238LA0A1B0GVL6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms