Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SCN2BO60939 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
SCN2BO60939 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 AQP7P1-201ENST00000412626 1045 ntBASIC12.1□□□□□ -0.47
SCN2BO60939 AC083873.1-201ENST00000421179 1099 ntBASIC12.1□□□□□ -0.47
SCN2BO60939 ASLP1-201ENST00000428790 637 ntBASIC12.1□□□□□ -0.47
SCN2BO60939 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.1□□□□□ -0.47
SCN2BO60939 AQP7P2-201ENST00000453967 1041 ntBASIC12.1□□□□□ -0.47
SCN2BO60939 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC12.1□□□□□ -0.47
SCN2BO60939 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.1□□□□□ -0.47
SCN2BO60939 AC106872.8-201ENST00000507651 684 ntBASIC12.1□□□□□ -0.47
SCN2BO60939 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC12.1□□□□□ -0.47
SCN2BO60939 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.1□□□□□ -0.47
SCN2BO60939 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.1□□□□□ -0.47
SCN2BO60939 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.1□□□□□ -0.47
SCN2BO60939 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 AC018645.3-201ENST00000628855 2646 ntBASIC12.1□□□□□ -0.47
SCN2BO60939 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 MORN4-203ENST00000478953 2225 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SCN2BO60939 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 CASP7-203ENST00000369318 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
SCN2BO60939 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.09□□□□□ -0.47
SCN2BO60939 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SCN2BO60939 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SCN2BO60939 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SCN2BO60939 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.09□□□□□ -0.47
SCN2BO60939 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.09□□□□□ -0.47
SCN2BO60939 AC010677.1-201ENST00000441690 412 ntBASIC12.09□□□□□ -0.47
SCN2BO60939 BPIFB5P-201ENST00000457066 1099 ntBASIC12.09□□□□□ -0.47
SCN2BO60939 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.09□□□□□ -0.47
SCN2BO60939 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.09□□□□□ -0.47
SCN2BO60939 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.09□□□□□ -0.47
SCN2BO60939 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC12.09□□□□□ -0.47
SCN2BO60939 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.09□□□□□ -0.47
SCN2BO60939 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SCN2BO60939 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 AC117500.5-201ENST00000623233 527 ntBASIC12.09□□□□□ -0.47
SCN2BO60939 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 DCK-204ENST00000504952 2614 ntTSL 3 BASIC12.09□□□□□ -0.47
SCN2BO60939 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC12.09□□□□□ -0.47
SCN2BO60939 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.09□□□□□ -0.47
SCN2BO60939 GTF2IP20-203ENST00000634905 2966 ntTSL 5 BASIC12.09□□□□□ -0.47
SCN2BO60939 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCN2BO60939 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SCN2BO60939 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms