Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 CCDC175-202ENST00000537690 2616 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC018521.1-202ENST00000641877 2655 ntBASIC10.48□□□□□ -0.73
RAB40CQ96S21 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RAB40CQ96S21 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC10.48□□□□□ -0.73
RAB40CQ96S21 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 FLJ37035-202ENST00000423178 2600 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 MIR324-201ENST00000362183 83 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 KRT18P62-201ENST00000446618 1287 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC073150.1-201ENST00000450406 1084 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 CXXC1P1-202ENST00000489409 1212 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 OR2A1-AS1-210ENST00000496968 531 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 RPL29P2-202ENST00000498671 657 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC012146.4-201ENST00000575546 271 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 RN7SL134P-201ENST00000579756 303 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 FAM90A2P-201ENST00000511144 1395 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 FAM90A25P-201ENST00000528404 1395 ntBASIC10.47□□□□□ -0.73
RAB40CQ96S21 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CDNF-202ENST00000378442 1492 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CD300LF-202ENST00000326165 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC10.47□□□□□ -0.73
RAB40CQ96S21 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 RCAN2-202ENST00000330430 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RAB40CQ96S21 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms