Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC6Q9Y625 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GPC6Q9Y625 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
GPC6Q9Y625 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.6■□□□□ 0.89
GPC6Q9Y625 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
GPC6Q9Y625 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
GPC6Q9Y625 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC6Q9Y625 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GPC6Q9Y625 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GPC6Q9Y625 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
GPC6Q9Y625 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.59■□□□□ 0.89
GPC6Q9Y625 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.59■□□□□ 0.89
GPC6Q9Y625 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC6Q9Y625 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GPC6Q9Y625 FP325331.1-202ENST00000623531 1380 ntBASIC20.59■□□□□ 0.89
GPC6Q9Y625 LINC01529-204ENST00000636474 1715 ntBASIC20.58■□□□□ 0.89
GPC6Q9Y625 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC6Q9Y625 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
GPC6Q9Y625 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC6Q9Y625 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC6Q9Y625 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.58■□□□□ 0.89
GPC6Q9Y625 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GPC6Q9Y625 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
GPC6Q9Y625 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GPC6Q9Y625 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
GPC6Q9Y625 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GPC6Q9Y625 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC6Q9Y625 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
GPC6Q9Y625 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC6Q9Y625 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.57■□□□□ 0.88
GPC6Q9Y625 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC6Q9Y625 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC6Q9Y625 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GPC6Q9Y625 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC6Q9Y625 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.56■□□□□ 0.88
GPC6Q9Y625 AL356441.2-201ENST00000443009 864 ntBASIC20.56■□□□□ 0.88
GPC6Q9Y625 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC6Q9Y625 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.56■□□□□ 0.88
GPC6Q9Y625 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
GPC6Q9Y625 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GPC6Q9Y625 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
GPC6Q9Y625 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC6Q9Y625 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC6Q9Y625 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
GPC6Q9Y625 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC6Q9Y625 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
GPC6Q9Y625 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC6Q9Y625 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC6Q9Y625 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC6Q9Y625 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.54■□□□□ 0.88
GPC6Q9Y625 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GPC6Q9Y625 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 AC087742.1-201ENST00000575880 1738 ntBASIC20.54■□□□□ 0.88
GPC6Q9Y625 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GPC6Q9Y625 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.54■□□□□ 0.88
GPC6Q9Y625 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.54■□□□□ 0.88
GPC6Q9Y625 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.54■□□□□ 0.88
GPC6Q9Y625 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 AC092667.1-201ENST00000434301 2586 ntBASIC20.54■□□□□ 0.88
GPC6Q9Y625 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC6Q9Y625 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC6Q9Y625 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC6Q9Y625 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC6Q9Y625 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GPC6Q9Y625 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GPC6Q9Y625 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.53■□□□□ 0.88
GPC6Q9Y625 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC6Q9Y625 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC6Q9Y625 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms