Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 MIR663A-201ENST00000385250 93 ntBASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 AC104771.1-201ENST00000603335 964 ntBASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN10AQ9Y5Y9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 CROCCP5-201ENST00000436658 830 ntBASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN10AQ9Y5Y9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SCN10AQ9Y5Y9 AL353803.4-201ENST00000565882 1934 ntBASIC24.33■■□□□ 1.49
SCN10AQ9Y5Y9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCN10AQ9Y5Y9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.33■■□□□ 1.49
SCN10AQ9Y5Y9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.33■■□□□ 1.49
SCN10AQ9Y5Y9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCN10AQ9Y5Y9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.33■■□□□ 1.48
SCN10AQ9Y5Y9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCN10AQ9Y5Y9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 ABCB10P4-201ENST00000566803 2184 ntBASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 KRT18P11-201ENST00000435214 1283 ntBASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.31■■□□□ 1.48
SCN10AQ9Y5Y9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.3■■□□□ 1.48
SCN10AQ9Y5Y9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SCN10AQ9Y5Y9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCN10AQ9Y5Y9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.3■■□□□ 1.48
SCN10AQ9Y5Y9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 AL139125.2-201ENST00000623134 1869 ntBASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 MFSD11-216ENST00000590393 1141 ntBASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCN10AQ9Y5Y9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 AC005224.4-201ENST00000583262 1652 ntBASIC24.28■■□□□ 1.48
SCN10AQ9Y5Y9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SCN10AQ9Y5Y9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCN10AQ9Y5Y9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 NCF1B-203ENST00000435988 1254 ntBASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCN10AQ9Y5Y9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms