Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLK4Q9HAZ1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 AL138724.1-201ENST00000606771 1088 ntBASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 LINC01529-204ENST00000636474 1715 ntBASIC21.18■□□□□ 0.98
CLK4Q9HAZ1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLK4Q9HAZ1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLK4Q9HAZ1 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.15■□□□□ 0.98
CLK4Q9HAZ1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.14■□□□□ 0.98
CLK4Q9HAZ1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 AC099791.2-201ENST00000605725 427 ntBASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 AC009086.3-201ENST00000623486 1008 ntBASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLK4Q9HAZ1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.13■□□□□ 0.97
CLK4Q9HAZ1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 SYT6-210ENST00000641643 1587 ntBASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 AL499627.2-201ENST00000606283 725 ntBASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.12■□□□□ 0.97
CLK4Q9HAZ1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms