Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 BHLHE23-202ENST00000612929 1109 ntBASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 DUX4L18-201ENST00000553347 1267 ntBASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 SLC25A24-204ENST00000569674 2357 ntBASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 LINC01529-204ENST00000636474 1715 ntBASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 AC074183.2-201ENST00000623112 922 ntBASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms