Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 BHLHE23-202ENST00000612929 1109 ntBASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ZNF556Q9HAH1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF556Q9HAH1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 DUX4L18-201ENST00000553347 1267 ntBASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF556Q9HAH1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF556Q9HAH1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF556Q9HAH1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF556Q9HAH1 SLC25A24-204ENST00000569674 2357 ntBASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 LINC01529-204ENST00000636474 1715 ntBASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF556Q9HAH1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 AC074183.2-201ENST00000623112 922 ntBASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF556Q9HAH1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms