Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40CQ96S21 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40CQ96S21 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB40CQ96S21 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40CQ96S21 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB40CQ96S21 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40CQ96S21 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40CQ96S21 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40CQ96S21 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB40CQ96S21 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB40CQ96S21 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAB40CQ96S21 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40CQ96S21 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB40CQ96S21 AC129492.7-201ENST00000622992 756 ntBASIC17.7■□□□□ 0.42
RAB40CQ96S21 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40CQ96S21 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB40CQ96S21 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RAB40CQ96S21 AC244015.2-201ENST00000616358 1861 ntBASIC17.69■□□□□ 0.42
RAB40CQ96S21 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40CQ96S21 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB40CQ96S21 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAB40CQ96S21 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB40CQ96S21 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40CQ96S21 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40CQ96S21 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40CQ96S21 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40CQ96S21 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40CQ96S21 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB40CQ96S21 AF131216.4-201ENST00000638924 1588 ntBASIC17.68■□□□□ 0.42
RAB40CQ96S21 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40CQ96S21 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40CQ96S21 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40CQ96S21 LINC01960-201ENST00000563759 1884 ntBASIC17.67■□□□□ 0.42
RAB40CQ96S21 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB40CQ96S21 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAB40CQ96S21 AC005229.4-201ENST00000610085 2198 ntBASIC17.66■□□□□ 0.42
RAB40CQ96S21 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40CQ96S21 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB40CQ96S21 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40CQ96S21 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms