Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLNQ969V3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NCLNQ969V3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.14■□□□□ 0.97
NCLNQ969V3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NCLNQ969V3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
NCLNQ969V3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NCLNQ969V3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NCLNQ969V3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
NCLNQ969V3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLNQ969V3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCLNQ969V3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCLNQ969V3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.11■□□□□ 0.97
NCLNQ969V3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.11■□□□□ 0.97
NCLNQ969V3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCLNQ969V3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.1■□□□□ 0.97
NCLNQ969V3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.1■□□□□ 0.97
NCLNQ969V3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.1■□□□□ 0.97
NCLNQ969V3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.1■□□□□ 0.97
NCLNQ969V3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.1■□□□□ 0.97
NCLNQ969V3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.1■□□□□ 0.97
NCLNQ969V3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLNQ969V3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
NCLNQ969V3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.09■□□□□ 0.97
NCLNQ969V3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NCLNQ969V3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.09■□□□□ 0.97
NCLNQ969V3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NCLNQ969V3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCLNQ969V3 AC079630.1-202ENST00000618127 1840 ntBASIC21.08■□□□□ 0.97
NCLNQ969V3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCLNQ969V3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.08■□□□□ 0.97
NCLNQ969V3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCLNQ969V3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NCLNQ969V3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
NCLNQ969V3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.08■□□□□ 0.96
NCLNQ969V3 AC242852.2-201ENST00000615738 1807 ntBASIC21.08■□□□□ 0.96
NCLNQ969V3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NCLNQ969V3 AC009102.2-201ENST00000606772 1639 ntBASIC21.07■□□□□ 0.96
NCLNQ969V3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCLNQ969V3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.07■□□□□ 0.96
NCLNQ969V3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCLNQ969V3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.07■□□□□ 0.96
NCLNQ969V3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCLNQ969V3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLNQ969V3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.07■□□□□ 0.96
NCLNQ969V3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NCLNQ969V3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NCLNQ969V3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLNQ969V3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLNQ969V3 ESRRAP2-201ENST00000418437 1549 ntBASIC21.06■□□□□ 0.96
NCLNQ969V3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NCLNQ969V3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.06■□□□□ 0.96
NCLNQ969V3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLNQ969V3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLNQ969V3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLNQ969V3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCLNQ969V3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCLNQ969V3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLNQ969V3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.05■□□□□ 0.96
NCLNQ969V3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms