Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
RAPGEF4Q8WZA2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RAPGEF4Q8WZA2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29■■■□□ 2.23
RAPGEF4Q8WZA2 OXCT2P1-201ENST00000447263 1535 ntBASIC28.99■■■□□ 2.23
RAPGEF4Q8WZA2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RAPGEF4Q8WZA2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RAPGEF4Q8WZA2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.99■■■□□ 2.23
RAPGEF4Q8WZA2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC28.98■■■□□ 2.23
RAPGEF4Q8WZA2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RAPGEF4Q8WZA2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RAPGEF4Q8WZA2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RAPGEF4Q8WZA2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC28.97■■■□□ 2.23
RAPGEF4Q8WZA2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
RAPGEF4Q8WZA2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
RAPGEF4Q8WZA2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.95■■■□□ 2.23
RAPGEF4Q8WZA2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
RAPGEF4Q8WZA2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 AC079140.4-201ENST00000507448 529 ntBASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RAPGEF4Q8WZA2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RAPGEF4Q8WZA2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 AC006970.2-201ENST00000450065 779 ntBASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC28.93■■■□□ 2.22
RAPGEF4Q8WZA2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 CROCCP5-201ENST00000436658 830 ntBASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 AC104771.1-201ENST00000603335 964 ntBASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.92■■■□□ 2.22
RAPGEF4Q8WZA2 AL139125.2-201ENST00000623134 1869 ntBASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 ABCB10P4-201ENST00000566803 2184 ntBASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 ESRRAP2-201ENST00000418437 1549 ntBASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 KRT18P11-201ENST00000435214 1283 ntBASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RAPGEF4Q8WZA2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.91■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms