Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC107Q8WV48 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 AC139530.1-201ENST00000575312 1977 ntBASIC18.84■□□□□ 0.61
CCDC107Q8WV48 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC107Q8WV48 FBXW4P1-201ENST00000426721 2239 ntBASIC18.84■□□□□ 0.61
CCDC107Q8WV48 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC107Q8WV48 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC107Q8WV48 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC107Q8WV48 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC107Q8WV48 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC107Q8WV48 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 AL031848.2-201ENST00000607670 837 ntBASIC18.82■□□□□ 0.6
CCDC107Q8WV48 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC107Q8WV48 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC107Q8WV48 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC107Q8WV48 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC107Q8WV48 AC079630.1-202ENST00000618127 1840 ntBASIC18.79■□□□□ 0.6
CCDC107Q8WV48 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC107Q8WV48 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms