Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 BID-214ENST00000617586 542 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01006Q8NI28 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 OXCT2P1-201ENST00000447263 1535 ntBASIC17.18■□□□□ 0.34
LINC01006Q8NI28 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 AC026185.1-201ENST00000445748 174 ntBASIC17.18■□□□□ 0.34
LINC01006Q8NI28 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.18■□□□□ 0.34
LINC01006Q8NI28 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01006Q8NI28 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01006Q8NI28 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC01006Q8NI28 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 AC079140.4-201ENST00000507448 529 ntBASIC17.15■□□□□ 0.34
LINC01006Q8NI28 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 ABCB10P4-201ENST00000566803 2184 ntBASIC17.15■□□□□ 0.34
LINC01006Q8NI28 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01006Q8NI28 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 AL139125.2-201ENST00000623134 1869 ntBASIC17.14■□□□□ 0.33
LINC01006Q8NI28 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.14■□□□□ 0.33
LINC01006Q8NI28 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01006Q8NI28 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms