Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.45■□□□□ 0.7
RFPL4BQ6ZWI9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 AC131212.1-201ENST00000613771 668 ntBASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL4BQ6ZWI9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL4BQ6ZWI9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 AC079630.1-202ENST00000618127 1840 ntBASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 AC233723.2-201ENST00000623798 2106 ntBASIC19.42■□□□□ 0.7
RFPL4BQ6ZWI9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFPL4BQ6ZWI9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 AL512631.2-201ENST00000604634 923 ntBASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFPL4BQ6ZWI9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 AC131281.2-201ENST00000520478 145 ntBASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFPL4BQ6ZWI9 C17orf82-201ENST00000623772 1530 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms