Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB3Q15768 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.72■□□□□ 0.59
EFNB3Q15768 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB3Q15768 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.71■□□□□ 0.59
EFNB3Q15768 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.71■□□□□ 0.59
EFNB3Q15768 AC034268.1-201ENST00000441047 882 ntBASIC18.71■□□□□ 0.59
EFNB3Q15768 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 AL162430.1-201ENST00000480705 870 ntBASIC18.71■□□□□ 0.59
EFNB3Q15768 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.71■□□□□ 0.59
EFNB3Q15768 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
EFNB3Q15768 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EFNB3Q15768 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EFNB3Q15768 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
EFNB3Q15768 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.71■□□□□ 0.59
EFNB3Q15768 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
EFNB3Q15768 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB3Q15768 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.71■□□□□ 0.59
EFNB3Q15768 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
EFNB3Q15768 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.7■□□□□ 0.58
EFNB3Q15768 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.7■□□□□ 0.58
EFNB3Q15768 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
EFNB3Q15768 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.7■□□□□ 0.58
EFNB3Q15768 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.7■□□□□ 0.58
EFNB3Q15768 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.7■□□□□ 0.58
EFNB3Q15768 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.7■□□□□ 0.58
EFNB3Q15768 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.7■□□□□ 0.58
EFNB3Q15768 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.7■□□□□ 0.58
EFNB3Q15768 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
EFNB3Q15768 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB3Q15768 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.7■□□□□ 0.58
EFNB3Q15768 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EFNB3Q15768 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.69■□□□□ 0.58
EFNB3Q15768 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.69■□□□□ 0.58
EFNB3Q15768 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EFNB3Q15768 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EFNB3Q15768 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EFNB3Q15768 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.69■□□□□ 0.58
EFNB3Q15768 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EFNB3Q15768 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.69■□□□□ 0.58
EFNB3Q15768 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.69■□□□□ 0.58
EFNB3Q15768 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.69■□□□□ 0.58
EFNB3Q15768 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EFNB3Q15768 LINC02228-203ENST00000641970 1355 ntBASIC18.68■□□□□ 0.58
EFNB3Q15768 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNB3Q15768 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EFNB3Q15768 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.68■□□□□ 0.58
EFNB3Q15768 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.68■□□□□ 0.58
EFNB3Q15768 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.68■□□□□ 0.58
EFNB3Q15768 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EFNB3Q15768 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.67■□□□□ 0.58
EFNB3Q15768 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.67■□□□□ 0.58
EFNB3Q15768 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNB3Q15768 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EFNB3Q15768 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
EFNB3Q15768 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.67■□□□□ 0.58
EFNB3Q15768 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.67■□□□□ 0.58
EFNB3Q15768 AC092666.2-201ENST00000613287 246 ntBASIC18.67■□□□□ 0.58
EFNB3Q15768 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNB3Q15768 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFNB3Q15768 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.67■□□□□ 0.58
EFNB3Q15768 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 AC012676.1-201ENST00000574705 1949 ntBASIC18.66■□□□□ 0.58
EFNB3Q15768 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EFNB3Q15768 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
EFNB3Q15768 OXCT2P1-201ENST00000447263 1535 ntBASIC18.66■□□□□ 0.58
EFNB3Q15768 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.66■□□□□ 0.58
EFNB3Q15768 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.66■□□□□ 0.58
EFNB3Q15768 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.66■□□□□ 0.58
EFNB3Q15768 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNB3Q15768 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EFNB3Q15768 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.66■□□□□ 0.58
EFNB3Q15768 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNB3Q15768 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNB3Q15768 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNB3Q15768 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 DUSP8P3-201ENST00000399571 1760 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms