Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN12P56749 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN12P56749 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN12P56749 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN12P56749 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN12P56749 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN12P56749 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN12P56749 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN12P56749 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN12P56749 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLDN12P56749 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19■□□□□ 0.63
CLDN12P56749 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19■□□□□ 0.63
CLDN12P56749 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLDN12P56749 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19■□□□□ 0.63
CLDN12P56749 THA1P-201ENST00000590384 1145 ntBASIC19■□□□□ 0.63
CLDN12P56749 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19■□□□□ 0.63
CLDN12P56749 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLDN12P56749 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19■□□□□ 0.63
CLDN12P56749 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19■□□□□ 0.63
CLDN12P56749 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN12P56749 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19■□□□□ 0.63
CLDN12P56749 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19■□□□□ 0.63
CLDN12P56749 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN12P56749 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLDN12P56749 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN12P56749 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN12P56749 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLDN12P56749 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN12P56749 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
CLDN12P56749 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN12P56749 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLDN12P56749 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLDN12P56749 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN12P56749 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLDN12P56749 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN12P56749 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN12P56749 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN12P56749 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN12P56749 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN12P56749 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN12P56749 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 KRT18P24-201ENST00000344739 1156 ntBASIC18.96■□□□□ 0.63
CLDN12P56749 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN12P56749 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN12P56749 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN12P56749 LINC01960-201ENST00000563759 1884 ntBASIC18.96■□□□□ 0.63
CLDN12P56749 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN12P56749 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN12P56749 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN12P56749 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN12P56749 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN12P56749 BHLHE23-202ENST00000612929 1109 ntBASIC18.95■□□□□ 0.62
CLDN12P56749 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN12P56749 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN12P56749 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN12P56749 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDN12P56749 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN12P56749 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDN12P56749 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN12P56749 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN12P56749 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN12P56749 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN12P56749 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms