Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC34P49427 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDC34P49427 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC34P49427 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDC34P49427 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC34P49427 AC073130.3-201ENST00000624389 2278 ntBASIC17.26■□□□□ 0.35
CDC34P49427 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC34P49427 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC34P49427 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC34P49427 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC34P49427 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC34P49427 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC34P49427 AC005229.4-201ENST00000610085 2198 ntBASIC17.26■□□□□ 0.35
CDC34P49427 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC34P49427 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC34P49427 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC34P49427 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC34P49427 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC34P49427 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC34P49427 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC34P49427 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC34P49427 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDC34P49427 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC34P49427 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC34P49427 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC34P49427 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDC34P49427 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDC34P49427 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDC34P49427 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC34P49427 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC34P49427 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDC34P49427 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDC34P49427 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC34P49427 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CDC34P49427 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC34P49427 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC34P49427 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC34P49427 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC34P49427 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDC34P49427 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC34P49427 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC34P49427 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC34P49427 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.22■□□□□ 0.35
CDC34P49427 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.22■□□□□ 0.35
CDC34P49427 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDC34P49427 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CDC34P49427 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC34P49427 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDC34P49427 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC34P49427 AC138932.1-201ENST00000534164 6830 ntBASIC17.21■□□□□ 0.35
CDC34P49427 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDC34P49427 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC34P49427 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC34P49427 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC34P49427 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC34P49427 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDC34P49427 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDC34P49427 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC34P49427 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.21■□□□□ 0.34
CDC34P49427 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDC34P49427 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC34P49427 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.2■□□□□ 0.34
CDC34P49427 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDC34P49427 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC34P49427 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDC34P49427 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms