Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.14■□□□□ 0.66
RAB3BP20337 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.14■□□□□ 0.66
RAB3BP20337 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3BP20337 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB3BP20337 AL121603.2-201ENST00000557373 2117 ntBASIC19.14■□□□□ 0.65
RAB3BP20337 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RAB3BP20337 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RAB3BP20337 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3BP20337 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RAB3BP20337 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3BP20337 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3BP20337 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3BP20337 RNF126P1-201ENST00000567452 1320 ntBASIC19.13■□□□□ 0.65
RAB3BP20337 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB3BP20337 AF131216.4-201ENST00000638924 1588 ntBASIC19.13■□□□□ 0.65
RAB3BP20337 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3BP20337 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3BP20337 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB3BP20337 AC244015.2-201ENST00000616358 1861 ntBASIC19.12■□□□□ 0.65
RAB3BP20337 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3BP20337 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3BP20337 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3BP20337 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3BP20337 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3BP20337 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3BP20337 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3BP20337 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3BP20337 AC073130.3-201ENST00000624389 2278 ntBASIC19.12■□□□□ 0.65
RAB3BP20337 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB3BP20337 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3BP20337 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3BP20337 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3BP20337 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RAB3BP20337 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3BP20337 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3BP20337 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3BP20337 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.11■□□□□ 0.65
RAB3BP20337 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3BP20337 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3BP20337 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RAB3BP20337 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RAB3BP20337 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3BP20337 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3BP20337 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3BP20337 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB3BP20337 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3BP20337 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RAB3BP20337 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3BP20337 LINC01960-201ENST00000563759 1884 ntBASIC19.1■□□□□ 0.65
RAB3BP20337 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAB3BP20337 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3BP20337 AC019171.1-201ENST00000601251 1056 ntBASIC19.1■□□□□ 0.65
RAB3BP20337 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RAB3BP20337 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RAB3BP20337 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3BP20337 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3BP20337 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB3BP20337 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3BP20337 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3BP20337 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RAB3BP20337 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RAB3BP20337 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.09■□□□□ 0.65
RAB3BP20337 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3BP20337 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3BP20337 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3BP20337 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RAB3BP20337 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.08■□□□□ 0.65
RAB3BP20337 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.08■□□□□ 0.65
RAB3BP20337 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3BP20337 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3BP20337 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.08■□□□□ 0.64
RAB3BP20337 AC120024.1-201ENST00000562672 995 ntBASIC19.08■□□□□ 0.64
RAB3BP20337 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RAB3BP20337 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.08■□□□□ 0.64
RAB3BP20337 MIR4449-201ENST00000578365 66 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms