Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 AL022069.1-201ENST00000568025 1636 ntBASIC21.04■□□□□ 0.96
LINGO3P0C6S8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LINGO3P0C6S8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 AC137630.3-201ENST00000607245 391 ntBASIC21.03■□□□□ 0.96
LINGO3P0C6S8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LINGO3P0C6S8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.02■□□□□ 0.96
LINGO3P0C6S8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.02■□□□□ 0.95
LINGO3P0C6S8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINGO3P0C6S8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINGO3P0C6S8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
LINGO3P0C6S8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.02■□□□□ 0.95
LINGO3P0C6S8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 AC009299.2-201ENST00000482477 511 ntBASIC21.01■□□□□ 0.95
LINGO3P0C6S8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.01■□□□□ 0.95
LINGO3P0C6S8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LINGO3P0C6S8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINGO3P0C6S8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINGO3P0C6S8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21■□□□□ 0.95
LINGO3P0C6S8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21■□□□□ 0.95
LINGO3P0C6S8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LINGO3P0C6S8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21■□□□□ 0.95
LINGO3P0C6S8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINGO3P0C6S8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINGO3P0C6S8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINGO3P0C6S8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.98■□□□□ 0.95
LINGO3P0C6S8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms