Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV3P03979 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV3P03979 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV3P03979 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TRGV3P03979 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV3P03979 AC106739.1-201ENST00000617035 715 ntBASIC17.2■□□□□ 0.34
TRGV3P03979 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRGV3P03979 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRGV3P03979 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV3P03979 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV3P03979 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRGV3P03979 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.19■□□□□ 0.34
TRGV3P03979 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV3P03979 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.19■□□□□ 0.34
TRGV3P03979 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRGV3P03979 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV3P03979 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV3P03979 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRGV3P03979 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRGV3P03979 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV3P03979 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.18■□□□□ 0.34
TRGV3P03979 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRGV3P03979 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV3P03979 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TRGV3P03979 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV3P03979 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV3P03979 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV3P03979 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV3P03979 OR2I1P-207ENST00000453522 948 ntBASIC17.17■□□□□ 0.34
TRGV3P03979 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.17■□□□□ 0.34
TRGV3P03979 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV3P03979 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV3P03979 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TRGV3P03979 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRGV3P03979 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRGV3P03979 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV3P03979 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV3P03979 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV3P03979 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV3P03979 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRGV3P03979 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRGV3P03979 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRGV3P03979 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 EDA-201ENST00000338901 1233 ntBASIC17.15■□□□□ 0.34
TRGV3P03979 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRGV3P03979 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.15■□□□□ 0.34
TRGV3P03979 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV3P03979 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRGV3P03979 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV3P03979 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRGV3P03979 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV3P03979 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV3P03979 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.14■□□□□ 0.33
TRGV3P03979 SLC47A1P1-202ENST00000449666 945 ntBASIC17.14■□□□□ 0.33
TRGV3P03979 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV3P03979 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.14■□□□□ 0.33
TRGV3P03979 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV3P03979 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV3P03979 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV3P03979 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV3P03979 LINC01960-201ENST00000563759 1884 ntBASIC17.14■□□□□ 0.33
TRGV3P03979 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV3P03979 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV3P03979 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV3P03979 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV3P03979 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRGV3P03979 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.13■□□□□ 0.33
TRGV3P03979 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms