Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PFDN1O60925 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.67■□□□□ 0.74
PFDN1O60925 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 LINC01006-201ENST00000333319 2292 ntBASIC19.67■□□□□ 0.74
PFDN1O60925 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
PFDN1O60925 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.67■□□□□ 0.74
PFDN1O60925 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PFDN1O60925 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
PFDN1O60925 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PFDN1O60925 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PFDN1O60925 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
PFDN1O60925 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.66■□□□□ 0.74
PFDN1O60925 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
PFDN1O60925 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PFDN1O60925 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PFDN1O60925 AL133380.1-201ENST00000506013 324 ntBASIC19.66■□□□□ 0.74
PFDN1O60925 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PFDN1O60925 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.65■□□□□ 0.74
PFDN1O60925 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.65■□□□□ 0.74
PFDN1O60925 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PFDN1O60925 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PFDN1O60925 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PFDN1O60925 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PFDN1O60925 AC080038.3-201ENST00000623346 1952 ntBASIC19.64■□□□□ 0.74
PFDN1O60925 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PFDN1O60925 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.64■□□□□ 0.73
PFDN1O60925 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.64■□□□□ 0.73
PFDN1O60925 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PFDN1O60925 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.63■□□□□ 0.73
PFDN1O60925 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PFDN1O60925 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PFDN1O60925 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.63■□□□□ 0.73
PFDN1O60925 HLA-L-211ENST00000482052 1765 ntBASIC19.63■□□□□ 0.73
PFDN1O60925 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PFDN1O60925 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PFDN1O60925 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.63■□□□□ 0.73
PFDN1O60925 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PFDN1O60925 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PFDN1O60925 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.62■□□□□ 0.73
PFDN1O60925 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PFDN1O60925 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PFDN1O60925 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PFDN1O60925 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PFDN1O60925 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PFDN1O60925 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PFDN1O60925 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PFDN1O60925 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
PFDN1O60925 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PFDN1O60925 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PFDN1O60925 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PFDN1O60925 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.61■□□□□ 0.73
PFDN1O60925 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.61■□□□□ 0.73
PFDN1O60925 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PFDN1O60925 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PFDN1O60925 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PFDN1O60925 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PFDN1O60925 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PFDN1O60925 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms