Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 AC073130.3-201ENST00000624389 2278 ntBASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV16A0A0A6YYK6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 C11orf96-202ENST00000528572 1834 ntBASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV16A0A0A6YYK6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 AL031848.2-201ENST00000607670 837 ntBASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV16A0A0A6YYK6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 PVT1_1.1-201ENST00000615125 194 ntBASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 AC092053.2-201ENST00000640557 1818 ntBASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV16A0A0A6YYK6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 AC120024.1-201ENST00000562672 995 ntBASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV16A0A0A6YYK6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms