Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 AC099791.2-201ENST00000605725 427 ntBASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 AC087742.1-201ENST00000575880 1738 ntBASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV12-2A0A075B6T6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 AC006455.2-201ENST00000429931 906 ntBASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 AC241377.3-202ENST00000626088 1088 ntBASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 AC241585.3-202ENST00000628937 1088 ntBASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 AC245100.8-202ENST00000629247 1058 ntBASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 LINC00526-201ENST00000581067 1875 ntBASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 AC080038.3-201ENST00000623346 1952 ntBASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-2A0A075B6T6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 AC242852.2-201ENST00000615738 1807 ntBASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 AC127496.7-201ENST00000625110 1798 ntBASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 ECEL1P1-201ENST00000373592 1742 ntBASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-2A0A075B6T6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 SRD5A1P1-201ENST00000442297 786 ntBASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-2A0A075B6T6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 LINC00565-201ENST00000562710 2331 ntBASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 pRNA.6-201ENST00000610482 90 ntBASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 pRNA.5-201ENST00000612139 90 ntBASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 pRNA.11-201ENST00000618423 90 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms