Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AHCYP7-201ENST00000560847 1308 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 RBP4-203ENST00000371469 814 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 RN7SKP212-201ENST00000410851 328 ntBASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ISL1-203ENST00000511384 981 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 SRP19-206ENST00000515463 660 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 TLE2-205ENST00000586422 389 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AC106782.5-201ENST00000616011 337 ntBASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPA3F8WFD2 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 DTX2P1-201ENST00000425797 1633 ntBASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPA3F8WFD2 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms