Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AC010997.1-201ENST00000447646 350 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AC114781.1-201ENST00000450559 1028 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AC092910.2-201ENST00000491262 348 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 RNA5SP288-201ENST00000516075 93 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AFG3L2P1-201ENST00000521792 1763 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 LINC02228-202ENST00000641261 2489 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 COQ4-202ENST00000372875 928 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 ASS1P1-201ENST00000402854 1237 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 FTH1P18-201ENST00000412071 549 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AP001331.1-201ENST00000413008 1015 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 MED15P3-201ENST00000413613 326 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC005822.1-201ENST00000414124 1034 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RBMX2P5-201ENST00000424312 969 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 ACTG1P23-201ENST00000437653 1074 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 TULP3P1-202ENST00000453253 1291 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC007679.1-201ENST00000458609 502 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 SNRPD2P2-201ENST00000473818 333 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RN7SL2-201ENST00000490232 300 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 GPX3-202ENST00000517973 612 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 DDX11L8-201ENST00000535849 366 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 RN7SL4P-201ENST00000584058 295 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 AC139100.2-201ENST00000616901 662 ntBASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPA3F8WFD2 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms