Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.35□□□□□ -0.43
CLK1P49759 AL354861.1-201ENST00000445213 355 ntBASIC12.35□□□□□ -0.43
CLK1P49759 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 AC079250.1-201ENST00000456046 531 ntBASIC12.35□□□□□ -0.43
CLK1P49759 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.35□□□□□ -0.43
CLK1P49759 RPL18AP3-201ENST00000462885 528 ntBASIC12.35□□□□□ -0.43
CLK1P49759 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.35□□□□□ -0.43
CLK1P49759 IGHV1-12-201ENST00000518307 205 ntBASIC12.35□□□□□ -0.43
CLK1P49759 AL132994.1-201ENST00000554098 400 ntBASIC12.35□□□□□ -0.43
CLK1P49759 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.35□□□□□ -0.43
CLK1P49759 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.35□□□□□ -0.43
CLK1P49759 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 AC128714.1-201ENST00000637035 887 ntBASIC12.35□□□□□ -0.43
CLK1P49759 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
CLK1P49759 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
CLK1P49759 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
CLK1P49759 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.35□□□□□ -0.43
CLK1P49759 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.35□□□□□ -0.43
CLK1P49759 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.35□□□□□ -0.43
CLK1P49759 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLK1P49759 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.34□□□□□ -0.43
CLK1P49759 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.34□□□□□ -0.43
CLK1P49759 AC092638.2-201ENST00000441105 947 ntBASIC12.34□□□□□ -0.43
CLK1P49759 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.34□□□□□ -0.43
CLK1P49759 AC006529.1-201ENST00000459978 637 ntBASIC12.34□□□□□ -0.43
CLK1P49759 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 AP002803.1-201ENST00000528836 498 ntBASIC12.34□□□□□ -0.43
CLK1P49759 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.34□□□□□ -0.43
CLK1P49759 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.34□□□□□ -0.43
CLK1P49759 RN7SL470P-201ENST00000583069 259 ntBASIC12.34□□□□□ -0.43
CLK1P49759 MIR8071-1-201ENST00000616769 65 ntBASIC12.34□□□□□ -0.43
CLK1P49759 MIR8071-2-201ENST00000616772 65 ntBASIC12.34□□□□□ -0.43
CLK1P49759 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.34□□□□□ -0.43
CLK1P49759 AC242376.2-201ENST00000619355 883 ntBASIC12.34□□□□□ -0.43
CLK1P49759 AC025262.2-201ENST00000623975 1056 ntBASIC12.34□□□□□ -0.43
CLK1P49759 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 SMCR5-201ENST00000543475 2844 ntBASIC12.34□□□□□ -0.43
CLK1P49759 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.34□□□□□ -0.43
CLK1P49759 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.34□□□□□ -0.43
CLK1P49759 GCM1-201ENST00000259803 2765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLK1P49759 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLK1P49759 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12.33□□□□□ -0.43
CLK1P49759 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CLK1P49759 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
CLK1P49759 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
CLK1P49759 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC12.33□□□□□ -0.43
CLK1P49759 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms