RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
GCM1-201ENST00000259803 MYT1Q01538 1121 aa19.83■□□□□ 0.77
GCM1-201ENST00000259803 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.77
GCM1-201ENST00000259803 SLC24A1O60721 1099 aa19.42■□□□□ 0.7
GCM1-201ENST00000259803 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
GCM1-201ENST00000259803 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
GCM1-201ENST00000259803 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
GCM1-201ENST00000259803 ERICH6Q7L0X2 663 aa18.6■□□□□ 0.57
GCM1-201ENST00000259803 APLP2Q06481 763 aa18.59■□□□□ 0.57
GCM1-201ENST00000259803 ABCC9O60706 1549 aa18.55■□□□□ 0.56
GCM1-201ENST00000259803 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
GCM1-201ENST00000259803 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
GCM1-201ENST00000259803 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
GCM1-201ENST00000259803 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
GCM1-201ENST00000259803 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
GCM1-201ENST00000259803 NACADO15069 1562 aa17.69■□□□□ 0.42
GCM1-201ENST00000259803 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
GCM1-201ENST00000259803 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
GCM1-201ENST00000259803 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
GCM1-201ENST00000259803 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
GCM1-201ENST00000259803 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
GCM1-201ENST00000259803 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
GCM1-201ENST00000259803 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
GCM1-201ENST00000259803 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
GCM1-201ENST00000259803 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
GCM1-201ENST00000259803 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
GCM1-201ENST00000259803 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
GCM1-201ENST00000259803 HRCP23327 699 aa17.08■□□□□ 0.33
GCM1-201ENST00000259803 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
GCM1-201ENST00000259803 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
GCM1-201ENST00000259803 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
GCM1-201ENST00000259803 ARXQ96QS3 562 aa16.88■□□□□ 0.29
GCM1-201ENST00000259803 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
GCM1-201ENST00000259803 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
GCM1-201ENST00000259803 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
GCM1-201ENST00000259803 RANGAP1P46060 587 aaPredicted RBP16.77■□□□□ 0.28
GCM1-201ENST00000259803 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
GCM1-201ENST00000259803 UBE2Q2Q8WVN8 375 aa16.72■□□□□ 0.27
GCM1-201ENST00000259803 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
GCM1-201ENST00000259803 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
GCM1-201ENST00000259803 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
GCM1-201ENST00000259803 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
GCM1-201ENST00000259803 PODXL2Q9NZ53 605 aa16.67■□□□□ 0.26
GCM1-201ENST00000259803 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
GCM1-201ENST00000259803 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
GCM1-201ENST00000259803 WIZO95785 1651 aa16.62■□□□□ 0.25
GCM1-201ENST00000259803 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
GCM1-201ENST00000259803 ATAD2BQ9ULI0 1458 aa16.56■□□□□ 0.24
GCM1-201ENST00000259803 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
GCM1-201ENST00000259803 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
GCM1-201ENST00000259803 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
GCM1-201ENST00000259803 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
GCM1-201ENST00000259803 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
GCM1-201ENST00000259803 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
GCM1-201ENST00000259803 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
GCM1-201ENST00000259803 PKNOX2Q96KN3 472 aa16.33■□□□□ 0.21
GCM1-201ENST00000259803 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
GCM1-201ENST00000259803 ANO8Q9HCE9 1232 aaPredicted RBP16.29■□□□□ 0.2
GCM1-201ENST00000259803 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
GCM1-201ENST00000259803 HOMEZQ8IX15 550 aa16.26■□□□□ 0.19
GCM1-201ENST00000259803 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
GCM1-201ENST00000259803 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
GCM1-201ENST00000259803 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
GCM1-201ENST00000259803 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
GCM1-201ENST00000259803 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
GCM1-201ENST00000259803 NESP48681 1621 aa16.18■□□□□ 0.18
GCM1-201ENST00000259803 TULP1O00294 542 aaPredicted RBP16.18■□□□□ 0.18
GCM1-201ENST00000259803 NEFLP07196 543 aa16.15■□□□□ 0.18
GCM1-201ENST00000259803 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
GCM1-201ENST00000259803 PDE4CQ08493 712 aa16.07■□□□□ 0.16
GCM1-201ENST00000259803 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
GCM1-201ENST00000259803 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
GCM1-201ENST00000259803 CFTRP13569 1480 aa15.97■□□□□ 0.15
GCM1-201ENST00000259803 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
GCM1-201ENST00000259803 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
GCM1-201ENST00000259803 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
GCM1-201ENST00000259803 ERICH6BQ5W0A0 696 aa15.87■□□□□ 0.13
GCM1-201ENST00000259803 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
GCM1-201ENST00000259803 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
GCM1-201ENST00000259803 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
GCM1-201ENST00000259803 NPM2Q86SE8 214 aaKnown RBP15.84■□□□□ 0.13
GCM1-201ENST00000259803 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
GCM1-201ENST00000259803 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
GCM1-201ENST00000259803 TAF7LQ5H9L4 462 aa15.81■□□□□ 0.12
GCM1-201ENST00000259803 SALL2Q9Y467 1007 aaPredicted RBP15.81■□□□□ 0.12
GCM1-201ENST00000259803 FGD1P98174 961 aa15.8■□□□□ 0.12
GCM1-201ENST00000259803 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
GCM1-201ENST00000259803 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
GCM1-201ENST00000259803 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.12
GCM1-201ENST00000259803 ZEB1P37275 1124 aaPredicted RBP15.75■□□□□ 0.11
GCM1-201ENST00000259803 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
GCM1-201ENST00000259803 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
GCM1-201ENST00000259803 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
GCM1-201ENST00000259803 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
GCM1-201ENST00000259803 CUX1P39880 1505 aa15.69■□□□□ 0.1
GCM1-201ENST00000259803 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
GCM1-201ENST00000259803 CCDC136Q96JN2 1154 aa15.68■□□□□ 0.1
GCM1-201ENST00000259803 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
GCM1-201ENST00000259803 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
GCM1-201ENST00000259803 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms