Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 CA15P2-201ENST00000611168 834 ntBASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 AC009086.3-201ENST00000623486 1008 ntBASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGB6Q9Y5F9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGB6Q9Y5F9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PCDHGB6Q9Y5F9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHGB6Q9Y5F9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHGB6Q9Y5F9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGB6Q9Y5F9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGB6Q9Y5F9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 AC092666.2-201ENST00000613287 246 ntBASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHGB6Q9Y5F9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 AC026271.2-201ENST00000428091 497 ntBASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB6Q9Y5F9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 MIR3181-201ENST00000578512 73 ntBASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB6Q9Y5F9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 BX842568.3-201ENST00000418104 571 ntBASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB6Q9Y5F9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB6Q9Y5F9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGB6Q9Y5F9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGB6Q9Y5F9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB6Q9Y5F9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB6Q9Y5F9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms