Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHB9Q9Y5E1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 AC022517.1-201ENST00000592429 346 ntBASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB9Q9Y5E1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 IKBKGP1-201ENST00000612193 1073 ntBASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB9Q9Y5E1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB9Q9Y5E1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHB9Q9Y5E1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHB9Q9Y5E1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PCDHB9Q9Y5E1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB9Q9Y5E1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
PCDHB9Q9Y5E1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 C9orf163-202ENST00000624034 2573 ntBASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 BX842568.3-201ENST00000418104 571 ntBASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB9Q9Y5E1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.27■■□□□ 1.15
PCDHB9Q9Y5E1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB9Q9Y5E1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 SLC47A1P1-202ENST00000449666 945 ntBASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 AC126544.1-201ENST00000580842 1059 ntBASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB9Q9Y5E1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms