Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RCL1Q9Y2P8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 AC005229.4-201ENST00000610085 2198 ntBASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 SPCS2P3-201ENST00000500401 656 ntBASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 AC073130.3-201ENST00000624389 2278 ntBASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RCL1Q9Y2P8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCL1Q9Y2P8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RCL1Q9Y2P8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 MIR639-201ENST00000384974 98 ntBASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCL1Q9Y2P8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RCL1Q9Y2P8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCL1Q9Y2P8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCL1Q9Y2P8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RCL1Q9Y2P8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms