Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.93■■□□□ 1.26
CD248Q9HCU0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.93■■□□□ 1.26
CD248Q9HCU0 AC097381.1-201ENST00000429019 1296 ntBASIC22.93■■□□□ 1.26
CD248Q9HCU0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.93■■□□□ 1.26
CD248Q9HCU0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CD248Q9HCU0 AC092666.2-201ENST00000613287 246 ntBASIC22.93■■□□□ 1.26
CD248Q9HCU0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CD248Q9HCU0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.93■■□□□ 1.26
CD248Q9HCU0 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.93■■□□□ 1.26
CD248Q9HCU0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CD248Q9HCU0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.92■■□□□ 1.26
CD248Q9HCU0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.92■■□□□ 1.26
CD248Q9HCU0 MIR3181-201ENST00000578512 73 ntBASIC22.92■■□□□ 1.26
CD248Q9HCU0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.92■■□□□ 1.26
CD248Q9HCU0 AP003733.4-201ENST00000623785 1697 ntBASIC22.92■■□□□ 1.26
CD248Q9HCU0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.92■■□□□ 1.26
CD248Q9HCU0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CD248Q9HCU0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 AC099791.1-201ENST00000416440 715 ntBASIC22.91■■□□□ 1.26
CD248Q9HCU0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.91■■□□□ 1.26
CD248Q9HCU0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.91■■□□□ 1.26
CD248Q9HCU0 AC008764.7-201ENST00000593779 1081 ntBASIC22.91■■□□□ 1.26
CD248Q9HCU0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 AL121603.2-201ENST00000557373 2117 ntBASIC22.91■■□□□ 1.26
CD248Q9HCU0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.91■■□□□ 1.26
CD248Q9HCU0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CD248Q9HCU0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CD248Q9HCU0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CD248Q9HCU0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CD248Q9HCU0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CD248Q9HCU0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CD248Q9HCU0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.9■■□□□ 1.26
CD248Q9HCU0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.89■■□□□ 1.26
CD248Q9HCU0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CD248Q9HCU0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CD248Q9HCU0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CD248Q9HCU0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.89■■□□□ 1.25
CD248Q9HCU0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CD248Q9HCU0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CD248Q9HCU0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CD248Q9HCU0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CD248Q9HCU0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.88■■□□□ 1.25
CD248Q9HCU0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CD248Q9HCU0 AC009086.3-201ENST00000623486 1008 ntBASIC22.88■■□□□ 1.25
CD248Q9HCU0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CD248Q9HCU0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CD248Q9HCU0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CD248Q9HCU0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.88■■□□□ 1.25
CD248Q9HCU0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.87■■□□□ 1.25
CD248Q9HCU0 AL137060.1-201ENST00000618151 2648 ntBASIC22.87■■□□□ 1.25
CD248Q9HCU0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CD248Q9HCU0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CD248Q9HCU0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CD248Q9HCU0 AC137767.1-201ENST00000602918 1920 ntBASIC22.87■■□□□ 1.25
CD248Q9HCU0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.87■■□□□ 1.25
CD248Q9HCU0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CD248Q9HCU0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.87■■□□□ 1.25
CD248Q9HCU0 AC087623.3-201ENST00000607047 1098 ntBASIC22.87■■□□□ 1.25
CD248Q9HCU0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CD248Q9HCU0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CD248Q9HCU0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CD248Q9HCU0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CD248Q9HCU0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CD248Q9HCU0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CD248Q9HCU0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CD248Q9HCU0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CD248Q9HCU0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CD248Q9HCU0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.86■■□□□ 1.25
CD248Q9HCU0 BX842568.3-201ENST00000418104 571 ntBASIC22.86■■□□□ 1.25
CD248Q9HCU0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CD248Q9HCU0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.86■■□□□ 1.25
CD248Q9HCU0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.86■■□□□ 1.25
CD248Q9HCU0 AC104564.3-201ENST00000582367 638 ntBASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms