Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.72■□□□□ 0.59
MED28Q9H204 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.72■□□□□ 0.59
MED28Q9H204 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.72■□□□□ 0.59
MED28Q9H204 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.72■□□□□ 0.59
MED28Q9H204 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
MED28Q9H204 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MED28Q9H204 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MED28Q9H204 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MED28Q9H204 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MED28Q9H204 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MED28Q9H204 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MED28Q9H204 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.71■□□□□ 0.59
MED28Q9H204 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.71■□□□□ 0.59
MED28Q9H204 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MED28Q9H204 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
MED28Q9H204 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MED28Q9H204 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
MED28Q9H204 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MED28Q9H204 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
MED28Q9H204 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
MED28Q9H204 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MED28Q9H204 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.7■□□□□ 0.58
MED28Q9H204 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.7■□□□□ 0.58
MED28Q9H204 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MED28Q9H204 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
MED28Q9H204 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.69■□□□□ 0.58
MED28Q9H204 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MED28Q9H204 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
MED28Q9H204 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MED28Q9H204 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
MED28Q9H204 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MED28Q9H204 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.69■□□□□ 0.58
MED28Q9H204 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MED28Q9H204 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MED28Q9H204 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MED28Q9H204 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MED28Q9H204 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.68■□□□□ 0.58
MED28Q9H204 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MED28Q9H204 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.68■□□□□ 0.58
MED28Q9H204 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.68■□□□□ 0.58
MED28Q9H204 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MED28Q9H204 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.68■□□□□ 0.58
MED28Q9H204 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.67■□□□□ 0.58
MED28Q9H204 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MED28Q9H204 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.67■□□□□ 0.58
MED28Q9H204 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MED28Q9H204 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.67■□□□□ 0.58
MED28Q9H204 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MED28Q9H204 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.66■□□□□ 0.58
MED28Q9H204 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MED28Q9H204 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.66■□□□□ 0.58
MED28Q9H204 AC126177.7-201ENST00000547904 679 ntBASIC18.66■□□□□ 0.58
MED28Q9H204 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MED28Q9H204 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.66■□□□□ 0.58
MED28Q9H204 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MED28Q9H204 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MED28Q9H204 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
MED28Q9H204 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MED28Q9H204 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MED28Q9H204 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.65■□□□□ 0.58
MED28Q9H204 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.65■□□□□ 0.58
MED28Q9H204 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MED28Q9H204 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.65■□□□□ 0.58
MED28Q9H204 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MED28Q9H204 AC244015.2-201ENST00000616358 1861 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms