Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA4Q9BXL8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA4Q9BXL8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA4Q9BXL8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 U85056.1-201ENST00000616429 682 ntBASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 AC012354.3-201ENST00000623734 483 ntBASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA4Q9BXL8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 AL121603.2-201ENST00000557373 2117 ntBASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA4Q9BXL8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA4Q9BXL8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 AL592293.1-201ENST00000502889 1188 ntBASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA4Q9BXL8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 AC004448.1-201ENST00000458332 883 ntBASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA4Q9BXL8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA4Q9BXL8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.64■□□□□ 0.74
CDCA4Q9BXL8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDCA4Q9BXL8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA4Q9BXL8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA4Q9BXL8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA4Q9BXL8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA4Q9BXL8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms