Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1CQ9BQE3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.64■□□□□ 0.9
TUBA1CQ9BQE3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1CQ9BQE3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBA1CQ9BQE3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 C11orf96-202ENST00000528572 1834 ntBASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1CQ9BQE3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 AL136116.3-201ENST00000402907 1138 ntBASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA1CQ9BQE3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 MIR4466-201ENST00000606121 54 ntBASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 AL022069.1-201ENST00000568025 1636 ntBASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBA1CQ9BQE3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 PKD1P6-201ENST00000343738 4769 ntBASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 AL512631.2-201ENST00000604634 923 ntBASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA1CQ9BQE3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA1CQ9BQE3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA1CQ9BQE3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TUBA1CQ9BQE3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms