Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 IGHV3-19-201ENST00000521488 291 ntBASIC17.04■□□□□ 0.32
DUX3Q96PT4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 MIR6821-201ENST00000617625 74 ntBASIC17.04■□□□□ 0.32
DUX3Q96PT4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX3Q96PT4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX3Q96PT4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX3Q96PT4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX3Q96PT4 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 AC097381.1-201ENST00000429019 1296 ntBASIC17.03■□□□□ 0.32
DUX3Q96PT4 OR2I1P-207ENST00000453522 948 ntBASIC17.03■□□□□ 0.32
DUX3Q96PT4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX3Q96PT4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX3Q96PT4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX3Q96PT4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX3Q96PT4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX3Q96PT4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX3Q96PT4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX3Q96PT4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX3Q96PT4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DUX3Q96PT4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DUX3Q96PT4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
DUX3Q96PT4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DUX3Q96PT4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DUX3Q96PT4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DUX3Q96PT4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.01■□□□□ 0.31
DUX3Q96PT4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.01■□□□□ 0.31
DUX3Q96PT4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DUX3Q96PT4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.01■□□□□ 0.31
DUX3Q96PT4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX3Q96PT4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DUX3Q96PT4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17■□□□□ 0.31
DUX3Q96PT4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17■□□□□ 0.31
DUX3Q96PT4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DUX3Q96PT4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DUX3Q96PT4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
DUX3Q96PT4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DUX3Q96PT4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
DUX3Q96PT4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17■□□□□ 0.31
DUX3Q96PT4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17■□□□□ 0.31
DUX3Q96PT4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 AL031602.1-201ENST00000633169 911 ntBASIC16.99■□□□□ 0.31
DUX3Q96PT4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
DUX3Q96PT4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUX3Q96PT4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms