Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 CA15P2-201ENST00000611168 834 ntBASIC19.7■□□□□ 0.74
CPNE4Q96A23 AC068587.7-201ENST00000641602 218 ntBASIC19.7■□□□□ 0.74
CPNE4Q96A23 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 AC010525.1-201ENST00000585559 441 ntBASIC19.69■□□□□ 0.74
CPNE4Q96A23 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE4Q96A23 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE4Q96A23 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.68■□□□□ 0.74
CPNE4Q96A23 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CPNE4Q96A23 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE4Q96A23 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE4Q96A23 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE4Q96A23 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 AP005435.1-201ENST00000529293 1178 ntBASIC19.67■□□□□ 0.74
CPNE4Q96A23 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE4Q96A23 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPNE4Q96A23 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE4Q96A23 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE4Q96A23 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CPNE4Q96A23 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE4Q96A23 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE4Q96A23 AC087239.1-201ENST00000622671 572 ntBASIC19.65■□□□□ 0.74
CPNE4Q96A23 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE4Q96A23 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE4Q96A23 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE4Q96A23 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPNE4Q96A23 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
CPNE4Q96A23 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.64■□□□□ 0.74
CPNE4Q96A23 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE4Q96A23 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.64■□□□□ 0.74
CPNE4Q96A23 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE4Q96A23 AC105265.2-201ENST00000467189 838 ntBASIC19.64■□□□□ 0.73
CPNE4Q96A23 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.64■□□□□ 0.73
CPNE4Q96A23 IGHV3-19-201ENST00000521488 291 ntBASIC19.64■□□□□ 0.73
CPNE4Q96A23 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE4Q96A23 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CPNE4Q96A23 AL031602.1-201ENST00000633169 911 ntBASIC19.64■□□□□ 0.73
CPNE4Q96A23 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CPNE4Q96A23 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms