Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 IGHV3-19-201ENST00000521488 291 ntBASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRIM48Q8IWZ4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM48Q8IWZ4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 RARRES2P6-201ENST00000567333 442 ntBASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM48Q8IWZ4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM48Q8IWZ4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 AC092068.2-201ENST00000590491 1708 ntBASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 AP005435.1-201ENST00000529293 1178 ntBASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM48Q8IWZ4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM48Q8IWZ4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM48Q8IWZ4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms