Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCHD4Q6ZW05 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PTCHD4Q6ZW05 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCHD4Q6ZW05 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCHD4Q6ZW05 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PTCHD4Q6ZW05 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
PTCHD4Q6ZW05 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 YBX1P4-201ENST00000392794 808 ntBASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.14■□□□□ 0.81
PTCHD4Q6ZW05 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
PTCHD4Q6ZW05 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 SNX5-217ENST00000606557 1087 ntBASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCHD4Q6ZW05 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 AC087742.1-201ENST00000575880 1738 ntBASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCHD4Q6ZW05 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCHD4Q6ZW05 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms