Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
FOXR1Q6PIV2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 MIR638-201ENST00000385237 100 ntBASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 AL136116.3-201ENST00000402907 1138 ntBASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 MIR4281-201ENST00000580852 62 ntBASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.78■■□□□ 1.24
FOXR1Q6PIV2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 AC131281.2-201ENST00000520478 145 ntBASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
FOXR1Q6PIV2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.77■■□□□ 1.23
FOXR1Q6PIV2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
FOXR1Q6PIV2 C11orf96-202ENST00000528572 1834 ntBASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 MTDHP2-201ENST00000601468 714 ntBASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 AL139246.5-201ENST00000606645 996 ntBASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 AC010997.5-201ENST00000609182 354 ntBASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
FOXR1Q6PIV2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
FOXR1Q6PIV2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
FOXR1Q6PIV2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.72■■□□□ 1.23
FOXR1Q6PIV2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
FOXR1Q6PIV2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms