Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 Z92544.1-202ENST00000571933 1220 ntBASIC18.98■□□□□ 0.63
C11orf88Q6PI97 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf88Q6PI97 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf88Q6PI97 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf88Q6PI97 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 GUSBP5-201ENST00000418136 578 ntBASIC18.94■□□□□ 0.62
C11orf88Q6PI97 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.94■□□□□ 0.62
C11orf88Q6PI97 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf88Q6PI97 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms