Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 SNX5-217ENST00000606557 1087 ntBASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCN1P1Q5VSP4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 MIR4508-201ENST00000584178 70 ntBASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCN1P1Q5VSP4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 AC139530.1-201ENST00000575312 1977 ntBASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LCN1P1Q5VSP4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCN1P1Q5VSP4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCN1P1Q5VSP4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCN1P1Q5VSP4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.78■□□□□ 0.76
LCN1P1Q5VSP4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCN1P1Q5VSP4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCN1P1Q5VSP4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.77■□□□□ 0.75
LCN1P1Q5VSP4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.77■□□□□ 0.75
LCN1P1Q5VSP4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LCN1P1Q5VSP4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.77■□□□□ 0.75
LCN1P1Q5VSP4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCN1P1Q5VSP4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCN1P1Q5VSP4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCN1P1Q5VSP4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
LCN1P1Q5VSP4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.74■□□□□ 0.75
LCN1P1Q5VSP4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LCN1P1Q5VSP4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCN1P1Q5VSP4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms