Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.72■□□□□ 0.91
RPP38P78345 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RPP38P78345 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.71■□□□□ 0.91
RPP38P78345 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.71■□□□□ 0.91
RPP38P78345 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.71■□□□□ 0.91
RPP38P78345 MIR4466-201ENST00000606121 54 ntBASIC20.71■□□□□ 0.91
RPP38P78345 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.71■□□□□ 0.91
RPP38P78345 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPP38P78345 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.71■□□□□ 0.91
RPP38P78345 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPP38P78345 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.7■□□□□ 0.91
RPP38P78345 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPP38P78345 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPP38P78345 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 DUX4L19-201ENST00000557448 1267 ntBASIC20.7■□□□□ 0.9
RPP38P78345 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.7■□□□□ 0.9
RPP38P78345 AC241377.3-202ENST00000626088 1088 ntBASIC20.7■□□□□ 0.9
RPP38P78345 AC241585.3-202ENST00000628937 1088 ntBASIC20.7■□□□□ 0.9
RPP38P78345 AC245100.8-202ENST00000629247 1058 ntBASIC20.7■□□□□ 0.9
RPP38P78345 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.7■□□□□ 0.9
RPP38P78345 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPP38P78345 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 AC242852.2-201ENST00000615738 1807 ntBASIC20.69■□□□□ 0.9
RPP38P78345 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.69■□□□□ 0.9
RPP38P78345 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.69■□□□□ 0.9
RPP38P78345 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPP38P78345 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
RPP38P78345 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.68■□□□□ 0.9
RPP38P78345 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.68■□□□□ 0.9
RPP38P78345 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.68■□□□□ 0.9
RPP38P78345 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPP38P78345 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.67■□□□□ 0.9
RPP38P78345 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPP38P78345 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.67■□□□□ 0.9
RPP38P78345 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.67■□□□□ 0.9
RPP38P78345 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.67■□□□□ 0.9
RPP38P78345 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 C17orf82-201ENST00000623772 1530 ntBASIC20.67■□□□□ 0.9
RPP38P78345 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPP38P78345 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP38P78345 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.66■□□□□ 0.9
RPP38P78345 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.66■□□□□ 0.9
RPP38P78345 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP38P78345 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP38P78345 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.66■□□□□ 0.9
RPP38P78345 ESRRAP2-201ENST00000418437 1549 ntBASIC20.66■□□□□ 0.9
RPP38P78345 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.66■□□□□ 0.9
RPP38P78345 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP38P78345 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP38P78345 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP38P78345 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP38P78345 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
RPP38P78345 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.65■□□□□ 0.9
RPP38P78345 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPP38P78345 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP38P78345 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
RPP38P78345 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP38P78345 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.65■□□□□ 0.9
RPP38P78345 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.65■□□□□ 0.9
RPP38P78345 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.65■□□□□ 0.9
RPP38P78345 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPP38P78345 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP38P78345 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
RPP38P78345 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP38P78345 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms