Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.24■□□□□ 0.03
CKS1BP61024 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS1BP61024 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.24■□□□□ 0.03
CKS1BP61024 AC018755.3-202ENST00000596210 929 ntBASIC15.24■□□□□ 0.03
CKS1BP61024 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS1BP61024 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS1BP61024 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.24■□□□□ 0.03
CKS1BP61024 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS1BP61024 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKS1BP61024 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.24■□□□□ 0.03
CKS1BP61024 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CKS1BP61024 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.24■□□□□ 0.03
CKS1BP61024 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CKS1BP61024 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.23■□□□□ 0.03
CKS1BP61024 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.23■□□□□ 0.03
CKS1BP61024 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 GPX1-201ENST00000419349 1106 ntBASIC15.23■□□□□ 0.03
CKS1BP61024 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.23■□□□□ 0.03
CKS1BP61024 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 AC133552.2-201ENST00000619106 1032 ntBASIC15.23■□□□□ 0.03
CKS1BP61024 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CKS1BP61024 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.23■□□□□ 0.03
CKS1BP61024 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS1BP61024 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS1BP61024 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CKS1BP61024 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.22■□□□□ 0.03
CKS1BP61024 ANOS2P-203ENST00000472227 1816 ntBASIC15.22■□□□□ 0.03
CKS1BP61024 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.22■□□□□ 0.03
CKS1BP61024 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CKS1BP61024 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.22■□□□□ 0.03
CKS1BP61024 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.22■□□□□ 0.03
CKS1BP61024 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CKS1BP61024 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.22■□□□□ 0.03
CKS1BP61024 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.22■□□□□ 0.03
CKS1BP61024 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.22■□□□□ 0.03
CKS1BP61024 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS1BP61024 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CKS1BP61024 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CKS1BP61024 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.21■□□□□ 0.03
CKS1BP61024 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CKS1BP61024 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.21■□□□□ 0.03
CKS1BP61024 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.21■□□□□ 0.03
CKS1BP61024 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKS1BP61024 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CKS1BP61024 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CKS1BP61024 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKS1BP61024 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CKS1BP61024 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKS1BP61024 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CKS1BP61024 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.2■□□□□ 0.02
CKS1BP61024 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CKS1BP61024 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CKS1BP61024 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CKS1BP61024 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CKS1BP61024 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 AL592295.1-201ENST00000400984 884 ntBASIC15.2■□□□□ 0.02
CKS1BP61024 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CKS1BP61024 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.2■□□□□ 0.02
CKS1BP61024 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS1BP61024 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CKS1BP61024 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKS1BP61024 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms