Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
CENPAP49450 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CENPAP49450 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPAP49450 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CENPAP49450 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.79■□□□□ 0.76
CENPAP49450 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 EP400NL-214ENST00000641289 2402 ntBASIC19.79■□□□□ 0.76
CENPAP49450 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CENPAP49450 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CENPAP49450 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CENPAP49450 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.79■□□□□ 0.76
CENPAP49450 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CENPAP49450 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CENPAP49450 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPAP49450 AC242852.2-201ENST00000615738 1807 ntBASIC19.79■□□□□ 0.76
CENPAP49450 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CENPAP49450 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 Z92544.1-202ENST00000571933 1220 ntBASIC19.78■□□□□ 0.76
CENPAP49450 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
CENPAP49450 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CENPAP49450 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPAP49450 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.77■□□□□ 0.76
CENPAP49450 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.77■□□□□ 0.76
CENPAP49450 LINC00526-201ENST00000581067 1875 ntBASIC19.77■□□□□ 0.76
CENPAP49450 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CENPAP49450 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CENPAP49450 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.77■□□□□ 0.76
CENPAP49450 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPAP49450 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CENPAP49450 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CENPAP49450 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.77■□□□□ 0.75
CENPAP49450 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.76■□□□□ 0.75
CENPAP49450 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.76■□□□□ 0.75
CENPAP49450 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.76■□□□□ 0.75
CENPAP49450 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CENPAP49450 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CENPAP49450 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.76■□□□□ 0.75
CENPAP49450 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.76■□□□□ 0.75
CENPAP49450 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.76■□□□□ 0.75
CENPAP49450 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.76■□□□□ 0.75
CENPAP49450 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CENPAP49450 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CENPAP49450 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CENPAP49450 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CENPAP49450 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CENPAP49450 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CENPAP49450 AC009299.2-201ENST00000482477 511 ntBASIC19.75■□□□□ 0.75
CENPAP49450 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CENPAP49450 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.75■□□□□ 0.75
CENPAP49450 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CENPAP49450 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CENPAP49450 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.74■□□□□ 0.75
CENPAP49450 LINC01529-204ENST00000636474 1715 ntBASIC19.74■□□□□ 0.75
CENPAP49450 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CENPAP49450 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.74■□□□□ 0.75
CENPAP49450 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.74■□□□□ 0.75
CENPAP49450 AC010997.5-201ENST00000609182 354 ntBASIC19.74■□□□□ 0.75
CENPAP49450 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CENPAP49450 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.74■□□□□ 0.75
CENPAP49450 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms