Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL8A2P25067 ANOS2P-203ENST00000472227 1816 ntBASIC18.58■□□□□ 0.57
COL8A2P25067 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
COL8A2P25067 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL8A2P25067 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.58■□□□□ 0.56
COL8A2P25067 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL8A2P25067 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL8A2P25067 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.58■□□□□ 0.56
COL8A2P25067 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL8A2P25067 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.58■□□□□ 0.56
COL8A2P25067 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL8A2P25067 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.58■□□□□ 0.56
COL8A2P25067 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.57■□□□□ 0.56
COL8A2P25067 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL8A2P25067 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.57■□□□□ 0.56
COL8A2P25067 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.57■□□□□ 0.56
COL8A2P25067 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.57■□□□□ 0.56
COL8A2P25067 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.57■□□□□ 0.56
COL8A2P25067 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL8A2P25067 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COL8A2P25067 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL8A2P25067 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.56■□□□□ 0.56
COL8A2P25067 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.56■□□□□ 0.56
COL8A2P25067 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.56■□□□□ 0.56
COL8A2P25067 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.56■□□□□ 0.56
COL8A2P25067 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.56■□□□□ 0.56
COL8A2P25067 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.56■□□□□ 0.56
COL8A2P25067 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL8A2P25067 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL8A2P25067 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL8A2P25067 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL8A2P25067 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL8A2P25067 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL8A2P25067 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
COL8A2P25067 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.55■□□□□ 0.56
COL8A2P25067 MIR6084-201ENST00000622012 110 ntBASIC18.55■□□□□ 0.56
COL8A2P25067 AL358852.1-201ENST00000623174 1268 ntBASIC18.55■□□□□ 0.56
COL8A2P25067 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.54■□□□□ 0.56
COL8A2P25067 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.54■□□□□ 0.56
COL8A2P25067 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.54■□□□□ 0.56
COL8A2P25067 AC092666.2-201ENST00000613287 246 ntBASIC18.54■□□□□ 0.56
COL8A2P25067 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL8A2P25067 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.54■□□□□ 0.56
COL8A2P25067 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.54■□□□□ 0.56
COL8A2P25067 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.53■□□□□ 0.56
COL8A2P25067 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL8A2P25067 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL8A2P25067 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.53■□□□□ 0.56
COL8A2P25067 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.53■□□□□ 0.56
COL8A2P25067 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 AC012414.1-201ENST00000556676 535 ntBASIC18.53■□□□□ 0.56
COL8A2P25067 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.53■□□□□ 0.56
COL8A2P25067 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL8A2P25067 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.53■□□□□ 0.56
COL8A2P25067 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.53■□□□□ 0.56
COL8A2P25067 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.52■□□□□ 0.56
COL8A2P25067 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.52■□□□□ 0.56
COL8A2P25067 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.52■□□□□ 0.56
COL8A2P25067 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL8A2P25067 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.52■□□□□ 0.56
COL8A2P25067 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.52■□□□□ 0.56
COL8A2P25067 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.52■□□□□ 0.56
COL8A2P25067 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.52■□□□□ 0.56
COL8A2P25067 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL8A2P25067 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms