Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.25■■□□□ 1.15
MMP2P08253 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MMP2P08253 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
MMP2P08253 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP2P08253 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
MMP2P08253 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP2P08253 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP2P08253 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MMP2P08253 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MMP2P08253 MIR4767-201ENST00000582827 78 ntBASIC22.24■■□□□ 1.15
MMP2P08253 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP2P08253 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP2P08253 ESRRAP2-201ENST00000418437 1549 ntBASIC22.24■■□□□ 1.15
MMP2P08253 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP2P08253 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
MMP2P08253 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MMP2P08253 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MMP2P08253 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.23■■□□□ 1.15
MMP2P08253 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MMP2P08253 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.23■■□□□ 1.15
MMP2P08253 AL031602.1-201ENST00000633169 911 ntBASIC22.23■■□□□ 1.15
MMP2P08253 AC135279.3-201ENST00000610945 1311 ntBASIC22.23■■□□□ 1.15
MMP2P08253 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MMP2P08253 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.22■■□□□ 1.15
MMP2P08253 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.22■■□□□ 1.15
MMP2P08253 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.22■■□□□ 1.15
MMP2P08253 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP2P08253 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
MMP2P08253 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
MMP2P08253 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MMP2P08253 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.21■■□□□ 1.15
MMP2P08253 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
MMP2P08253 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.21■■□□□ 1.15
MMP2P08253 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
MMP2P08253 AC106739.1-201ENST00000617035 715 ntBASIC22.21■■□□□ 1.15
MMP2P08253 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.21■■□□□ 1.15
MMP2P08253 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MMP2P08253 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MMP2P08253 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MMP2P08253 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
MMP2P08253 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MMP2P08253 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MMP2P08253 AC127496.7-201ENST00000625110 1798 ntBASIC22.2■■□□□ 1.14
MMP2P08253 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MMP2P08253 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MMP2P08253 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.2■■□□□ 1.14
MMP2P08253 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.2■■□□□ 1.14
MMP2P08253 SLC47A1P1-202ENST00000449666 945 ntBASIC22.2■■□□□ 1.14
MMP2P08253 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.2■■□□□ 1.14
MMP2P08253 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.2■■□□□ 1.14
MMP2P08253 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MMP2P08253 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MMP2P08253 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
MMP2P08253 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
MMP2P08253 PBX2P1-201ENST00000493219 1291 ntBASIC22.19■■□□□ 1.14
MMP2P08253 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.19■■□□□ 1.14
MMP2P08253 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
MMP2P08253 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP2P08253 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
MMP2P08253 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MMP2P08253 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
MMP2P08253 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MMP2P08253 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
MMP2P08253 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MMP2P08253 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
MMP2P08253 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MMP2P08253 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.18■■□□□ 1.14
MMP2P08253 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MMP2P08253 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
MMP2P08253 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.18■■□□□ 1.14
MMP2P08253 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MMP2P08253 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.17■■□□□ 1.14
MMP2P08253 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.17■■□□□ 1.14
MMP2P08253 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.17■■□□□ 1.14
MMP2P08253 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.17■■□□□ 1.14
MMP2P08253 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.17■■□□□ 1.14
MMP2P08253 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.17■■□□□ 1.14
MMP2P08253 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP2P08253 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms